STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlh-27BHLH domain-containing protein. (268 aa)    
Predicted Functional Partners:
ref-1
REgulator of Fusion.
   
  
 0.707
T24E12.13
Uncharacterized protein.
   
  
 0.678
flh-1
FLYWCH-type domain-containing protein.
   
  
 0.675
T24E12.1
Uncharacterized protein.
   
  
 0.669
mxl-3
BHLH domain-containing protein.
      
 0.666
nfi-1
CTF/NF-I domain-containing protein.
      
 0.660
hlh-11
Helix-loop-helix protein 11.
      
 0.627
C29E4.12
Protein FMC1 homolog; Belongs to the FMC1 family.
      
 0.569
tbx-32
Putative T-box protein 32.
   
  
 0.564
Y43D4A.6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.563
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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