STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17C3.1Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
W03D8.8
Uncharacterized protein.
     
 0.941
T05E7.1
Uncharacterized protein.
     
 0.938
pmp-4
Peroxisomal Membrane Protein related.
   
  
 0.825
ech-8
Enoyl-CoA Hydratase.
  
 
 0.823
ech-9
Enoyl-CoA Hydratase.
  
 
 0.819
hacd-1
Hydroxy-Acyl-CoA Dehydrogenase.
    
 0.811
acox-1.2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
  
 0.683
prx-13
Probable peroxisomal membrane protein PEX13; Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5) (By similarity); Belongs to the peroxin-13 family.
   
  
 0.576
ech-4
ACB domain-containing protein.
  
 
 0.517
prx-11
PeRoXisome assembly factor.
   
  
 0.516
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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