Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ceh-82 | madf-2 | F45C12.2.1 | F36D1.1.1 | C. Elegans Homeobox. | MADF domain-containing protein. | 0.763 |
ceh-82 | miz-1 | F45C12.2.1 | R13.4a.1 | C. Elegans Homeobox. | SP-RING-type domain-containing protein. | 0.545 |
ceh-82 | nhr-156 | F45C12.2.1 | C17E7.1.1 | C. Elegans Homeobox. | Nuclear Hormone Receptor family. | 0.699 |
ceh-82 | zip-8 | F45C12.2.1 | F23F12.9a.1 | C. Elegans Homeobox. | bZIP transcription factor 8. | 0.512 |
cyp-33C2 | nhr-156 | C45H4.17a.1 | C17E7.1.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | Nuclear Hormone Receptor family. | 0.766 |
far-5 | hpl-1 | F15B9.3a.1 | K08H2.6.1 | Fatty Acid/Retinol binding protein. | Heterochromatin protein 1 homolog. | 0.431 |
far-5 | madf-2 | F15B9.3a.1 | F36D1.1.1 | Fatty Acid/Retinol binding protein. | MADF domain-containing protein. | 0.552 |
far-5 | nhr-156 | F15B9.3a.1 | C17E7.1.1 | Fatty Acid/Retinol binding protein. | Nuclear Hormone Receptor family. | 0.463 |
hpl-1 | far-5 | K08H2.6.1 | F15B9.3a.1 | Heterochromatin protein 1 homolog. | Fatty Acid/Retinol binding protein. | 0.431 |
hpl-1 | madf-2 | K08H2.6.1 | F36D1.1.1 | Heterochromatin protein 1 homolog. | MADF domain-containing protein. | 0.605 |
hpl-1 | nhr-156 | K08H2.6.1 | C17E7.1.1 | Heterochromatin protein 1 homolog. | Nuclear Hormone Receptor family. | 0.502 |
lim-7 | madf-2 | C04F1.3.1 | F36D1.1.1 | LIM domain family. | MADF domain-containing protein. | 0.551 |
lim-7 | miz-1 | C04F1.3.1 | R13.4a.1 | LIM domain family. | SP-RING-type domain-containing protein. | 0.403 |
lim-7 | nhr-156 | C04F1.3.1 | C17E7.1.1 | LIM domain family. | Nuclear Hormone Receptor family. | 0.461 |
madf-2 | ceh-82 | F36D1.1.1 | F45C12.2.1 | MADF domain-containing protein. | C. Elegans Homeobox. | 0.763 |
madf-2 | far-5 | F36D1.1.1 | F15B9.3a.1 | MADF domain-containing protein. | Fatty Acid/Retinol binding protein. | 0.552 |
madf-2 | hpl-1 | F36D1.1.1 | K08H2.6.1 | MADF domain-containing protein. | Heterochromatin protein 1 homolog. | 0.605 |
madf-2 | lim-7 | F36D1.1.1 | C04F1.3.1 | MADF domain-containing protein. | LIM domain family. | 0.551 |
madf-2 | miz-1 | F36D1.1.1 | R13.4a.1 | MADF domain-containing protein. | SP-RING-type domain-containing protein. | 0.788 |
madf-2 | nhr-156 | F36D1.1.1 | C17E7.1.1 | MADF domain-containing protein. | Nuclear Hormone Receptor family. | 0.862 |
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