Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cki-2 | folr-1 | T05A6.2b.1 | C17G1.1.1 | CKI family (Cyclin-dependent Kinase Inhibitor). | FOLate Receptor homolog. | 0.698 |
csk-1 | folr-1 | Y48G1C.2b.1 | C17G1.1.1 | Tyrosine-protein kinase csk-1; Non-receptor tyrosine-protein kinase which plays a role in pharynx function by regulating pumping and the orientation of pharyngeal muscle fibers, independently of src-1 and src-2. May phosphorylate and thereby negatively regulate src-1 and src-2 activities. | FOLate Receptor homolog. | 0.530 |
dhfr-1 | folr-1 | C36B1.7.1 | C17G1.1.1 | Putative dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (By similarity). | FOLate Receptor homolog. | 0.420 |
folr-1 | cki-2 | C17G1.1.1 | T05A6.2b.1 | FOLate Receptor homolog. | CKI family (Cyclin-dependent Kinase Inhibitor). | 0.698 |
folr-1 | csk-1 | C17G1.1.1 | Y48G1C.2b.1 | FOLate Receptor homolog. | Tyrosine-protein kinase csk-1; Non-receptor tyrosine-protein kinase which plays a role in pharynx function by regulating pumping and the orientation of pharyngeal muscle fibers, independently of src-1 and src-2. May phosphorylate and thereby negatively regulate src-1 and src-2 activities. | 0.530 |
folr-1 | dhfr-1 | C17G1.1.1 | C36B1.7.1 | FOLate Receptor homolog. | Putative dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (By similarity). | 0.420 |
folr-1 | folt-1 | C17G1.1.1 | C06H2.4.1 | FOLate Receptor homolog. | Folate transporter 1; Folate transporter; Belongs to the reduced folate carrier (RFC) transporter (TC 2.A.48) family. | 0.850 |
folt-1 | folr-1 | C06H2.4.1 | C17G1.1.1 | Folate transporter 1; Folate transporter; Belongs to the reduced folate carrier (RFC) transporter (TC 2.A.48) family. | FOLate Receptor homolog. | 0.850 |