STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17H12.3Tyrosine-protein phosphatase. (374 aa)    
Predicted Functional Partners:
nkb-2
Na+/K+ ATPase, Beta subunit.
   
    0.862
rmd-3
Regulator of Microtubule Dynamics.
   
   0.851
F26F4.2
Uncharacterized protein.
   
    0.846
F31E8.5
Uncharacterized protein.
   
    0.846
ttbk-2
Protein kinase domain-containing protein.
   
    0.846
smz-2
Sperm Meiosis PDZ domain containing proteins.
   
    0.846
Y38H8A.3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.846
C24D10.2
Uncharacterized protein.
   
    0.829
W02B12.12
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.809
R10E9.2
Uncharacterized protein.
   
    0.785
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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