STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17H12.5Uncharacterized protein. (443 aa)    
Predicted Functional Partners:
C38C10.3
Uncharacterized protein C38C10.3.
   
    0.818
valv-1
LIM zinc-binding domain-containing protein.
   
  
 0.759
isy-1
Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family.
      
 0.698
BE10.1
Uncharacterized protein.
   
    0.641
K01H12.4
Uncharacterized protein.
   
    0.641
C18H7.4
Tyrosine-protein kinase.
   
   0.639
C36H8.1
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.639
ZK945.7
Uncharacterized protein ZK945.7.
   
    0.639
Y57G11A.2
Uncharacterized protein.
   
   0.637
C17H12.3
Tyrosine-protein phosphatase.
   
   
0.635
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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