STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zipt-3Zrt (ZRT), Irt-(IRT-) like Protein Transporter. (363 aa)    
Predicted Functional Partners:
gop-3
SAM50-like protein gop-3; May play a role in the maintenance of the structure of mitochondrial cristae; Belongs to the SAM50/omp85 family.
   
 
 0.564
mtx-1
Metaxin-1 homolog; Involved in transport of proteins into the mitochondrion. Essential for embryonic development (By similarity); Belongs to the metaxin family.
   
 
 0.550
zipt-1
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
  
 
 
0.484
zipt-2.3
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
  
  
 
0.483
zipt-2.4
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
  
 
 
0.480
zipt-2.2
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
  
  
 
0.443
zipt-2.1
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
  
  
 
0.436
tomm-40
Mitochondrial import receptor subunit TOM40 homolog; Channel-forming protein essential for import of protein precursors into mitochondria. Specifically required for nnt-1 accumulation in the mitochondria and may be involved in the secretion of daf-28/insulin from the mitochondria. Required for embryonic and larval development.
   
 
 0.425
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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