STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18E3.9Uncharacterized protein. (302 aa)    
Predicted Functional Partners:
ZK1248.15
WW domain-containing protein.
   
  
 0.822
C01G8.1
Uncharacterized protein.
   
  
 0.765
C08F8.3
Uncharacterized protein.
   
  
 0.758
C48B4.11
Uncharacterized protein C48B4.11.
   
  
 0.751
F54D10.5
Uncharacterized protein.
   
  
 0.751
B0261.7
Uncharacterized protein.
   
  
 0.750
ZK1067.3
Uncharacterized protein.
   
  
 0.749
C28A5.1
Uncharacterized protein.
   
  
 0.741
F41G3.6
Uncharacterized protein.
   
  
 0.741
C39E9.12
SAP domain-containing protein.
   
  
 0.739
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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