STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bgnt-1.4B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog. (382 aa)    
Predicted Functional Partners:
bgnt-1.5
B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog.
     
 
0.900
lge-1
Glycosyltransferase-like protein LARGE; Probable glycosyltransferase; Belongs to the glycosyltransferase 8 family.
     
  0.900
agr-1
AGRin (Synaptic protein) homolog family member.
   
 
 0.773
dgn-1
Peptidase S72 domain-containing protein.
      
 0.471
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.