STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18H2.5Uncharacterized protein. (1195 aa)    
Predicted Functional Partners:
W03F11.4
Protein-tyrosine-phosphatase.
   
    0.493
F37A4.4
Ankyrin repeat-containing protein F37A4.4.
   
   
0.491
Y113G7C.1
Protein-tyrosine-phosphatase.
   
    0.466
acs-18
AMP-binding domain-containing protein.
   
    0.463
rnh-1.1
RNase H domain-containing protein.
   
    0.457
F36D3.5
Uncharacterized protein.
   
   
0.455
F44G3.7
Uncharacterized protein; Belongs to the serpin family.
   
    0.455
F27C8.5
BTB domain-containing protein.
   
    0.454
tag-164
Uncharacterized protein.
   
 
 0.454
moa-1
Modifier Of Apl-1 activity.
   
    0.452
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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