STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascc-1KH domain-containing protein. (393 aa)    
Predicted Functional Partners:
dap-3
Mammalian cell Death Associated Protein related.
    
   0.891
rps-11
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.877
trip-4
Zf-C2HC5 domain-containing protein.
   
 
 0.858
mrpl-47
Mitochondrial Ribosomal Protein, Large.
   
   0.857
mrpl-13
Mitochondrial Ribosomal Protein, Large.
   
   0.857
mrpl-11
Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
    
   0.851
sod-3
Superoxide dismutase [Mn] 2, mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
    
   0.851
mrpl-34
L51_S25_CI-B8 domain-containing protein.
   
   0.851
mrps-18C
Putative 39S ribosomal protein L3, mitochondrial.
   
   0.851
sod-2
Superoxide dismutase [Mn] 1, mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
    
   0.851
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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