STRINGSTRING
col-124 protein (Caenorhabditis elegans) - STRING interaction network
"col-124" - COLlagen family member in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col-124COLlagen family member (col-124) (291 aa)    
Predicted Functional Partners:
col-19
Cuticle collagen 19 ; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (289 aa)
     
        0.954
col-20
COLlagen family member (col-20) (288 aa)
     
     
0.952
col-140
COLlagen family member (col-140) (289 aa)
     
        0.948
col-119
COLlagen family member (col-119) (289 aa)
     
     
0.943
col-122
COLlagen family member (col-122) (300 aa)
     
     
0.936
col-178
COLlagen family member (col-178) (283 aa)
     
     
0.885
col-184
COLlagen family member (col-184) (291 aa)
   
     
0.862
col-139
COLlagen family member (col-139) (310 aa)
     
     
0.854
col-181
COLlagen family member (col-181) (332 aa)
   
     
0.850
col-8
Cuticle collagen 8 ; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (282 aa)
     
        0.847
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
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