STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkh-10Fork-head domain-containing protein. (194 aa)    
Predicted Functional Partners:
klu-1
KLUmpfuss related.
    
 
 0.849
C34F6.9
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.814
F56A8.3
Uncharacterized protein.
      
 0.809
fkh-3
Fork-head domain-containing protein.
   
 
 0.791
fkh-4
Fork-head domain-containing protein.
   
 
 0.787
fkh-5
Putative forkhead-related transcription factor fkh-5.
      
 0.760
F57E7.1
Uncharacterized protein.
      
 0.660
elt-4
GATA-type domain-containing protein.
  
 
 
 0.645
ces-1
CEll death Specification.
   
  
 0.628
ztf-11
Zinc finger protein ztf-11; Transcriptional repressor which promotes neuronal differentiation during embryonic and postembryonic neurogenesis. Together with components of the MuvB corepressor complex, negatively regulates the expression of non-neuronal genes during neurogenesis. Required for the generation of postembryonic neurons from epidermal cells. Belongs to the MYT1 family.
   
  
 0.585
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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