STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhr-30Nuclear Hormone Receptor family. (416 aa)    
Predicted Functional Partners:
nhr-52
Nuclear hormone receptor family member nhr-52; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
  
    0.598
F19F10.1
ETS domain-containing protein.
  
 
   0.534
ets-7
ETS domain-containing protein.
  
 
   0.534
npax-4
Paired domain-containing protein.
  
     0.531
daf-14
MH2 domain-containing protein.
  
 
   0.526
ets-8
ETS domain-containing protein.
  
 
   0.519
daf-8
Dwarfin sma.
  
 
   0.514
nhr-26
Nuclear Hormone Receptor family.
  
     0.503
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
  
     0.496
lin-1
ETS domain-containing protein.
  
 
   0.491
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.