STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C25F9.4SNF2_N domain-containing protein. (592 aa)    
Predicted Functional Partners:
F52G3.4
annotation not available
  
 
 0.828
F59H6.5
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.827
Y46B2A.2
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.827
F46G11.1
SF4 helicase domain-containing protein.
      
 0.807
fbxc-55
F-box C protein.
      
 0.805
F33H12.6
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.786
Y16E11A.2
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.786
F52G3.3
ATP-dependent DNA helicase.
  
 
 0.785
let-765
Protein strawberry notch homolog; Transcriptional activator that functions upstream of the let- 60/Ras and let-23/EGFR signaling pathways to positively regulate lin-3 expression and thereby promote vulval induction. Plays a role in excretory duct development. Plays a role in male tail development.
   
 
 0.713
pcn-1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.677
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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