STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C26B2.2Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
Y44A6D.5
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
    0.538
Y38H8A.4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.478
C17H12.5
Uncharacterized protein.
   
    0.465
C17H12.3
Tyrosine-protein phosphatase.
   
    0.463
pck-3
Phosphoenolypyruvate CarboxyKinase.
   
    0.459
B0218.7
Uncharacterized protein.
   
    0.456
comp-1
Protein kinase domain-containing protein.
   
    0.455
irld-4
Recep_L_domain domain-containing protein.
   
    0.452
C06A1.3
Putative serine/threonine-protein phosphatase C06A1.3.
   
    0.448
F42A9.7
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.443
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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