Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
attf-5 | flh-2 | T04G9.1a.1 | C26E6.2.1 | AT hook Transcription Factor family. | FLYWCH-type domain-containing protein. | 0.668 |
attf-5 | gfi-3 | T04G9.1a.1 | M163.4.1 | AT hook Transcription Factor family. | Protein gfi-3; Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins. Required for the metaphase to anaphase transition in meiosis. | 0.663 |
attf-5 | miz-1 | T04G9.1a.1 | R13.4a.1 | AT hook Transcription Factor family. | SP-RING-type domain-containing protein. | 0.628 |
attf-5 | somi-1 | T04G9.1a.1 | M04G12.4a.1 | AT hook Transcription Factor family. | Suppressor of Overexpressed MIcro-RNA. | 0.611 |
flh-1 | flh-2 | Y11D7A.12a.1 | C26E6.2.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.483 |
flh-1 | flh-3 | Y11D7A.12a.1 | Y11D7A.13.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.732 |
flh-1 | lsl-1 | Y11D7A.12a.1 | F52F12.4.1 | FLYWCH-type domain-containing protein. | LSY-2-Like. | 0.685 |
flh-1 | peb-1 | Y11D7A.12a.1 | T14F9.4a.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.698 |
flh-1 | rbm-28 | Y11D7A.12a.1 | R05H10.2.1 | FLYWCH-type domain-containing protein. | RNA Binding Motif protein homolog. | 0.762 |
flh-1 | ztf-8 | Y11D7A.12a.1 | ZC395.8.1 | FLYWCH-type domain-containing protein. | Zinc finger putative Transcription Factor family. | 0.491 |
flh-2 | attf-5 | C26E6.2.1 | T04G9.1a.1 | FLYWCH-type domain-containing protein. | AT hook Transcription Factor family. | 0.668 |
flh-2 | flh-1 | C26E6.2.1 | Y11D7A.12a.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.483 |
flh-2 | flh-3 | C26E6.2.1 | Y11D7A.13.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.512 |
flh-2 | gfi-3 | C26E6.2.1 | M163.4.1 | FLYWCH-type domain-containing protein. | Protein gfi-3; Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins. Required for the metaphase to anaphase transition in meiosis. | 0.665 |
flh-2 | lsl-1 | C26E6.2.1 | F52F12.4.1 | FLYWCH-type domain-containing protein. | LSY-2-Like. | 0.694 |
flh-2 | miz-1 | C26E6.2.1 | R13.4a.1 | FLYWCH-type domain-containing protein. | SP-RING-type domain-containing protein. | 0.670 |
flh-2 | peb-1 | C26E6.2.1 | T14F9.4a.1 | FLYWCH-type domain-containing protein. | FLYWCH-type domain-containing protein. | 0.761 |
flh-2 | rbm-28 | C26E6.2.1 | R05H10.2.1 | FLYWCH-type domain-containing protein. | RNA Binding Motif protein homolog. | 0.695 |
flh-2 | somi-1 | C26E6.2.1 | M04G12.4a.1 | FLYWCH-type domain-containing protein. | Suppressor of Overexpressed MIcro-RNA. | 0.541 |
flh-2 | ztf-8 | C26E6.2.1 | ZC395.8.1 | FLYWCH-type domain-containing protein. | Zinc finger putative Transcription Factor family. | 0.591 |
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