STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps-3040S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (130 aa)    
Predicted Functional Partners:
rpl-4
60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family.
   
 
 0.999
rpl-2
60S ribosomal protein L8.
   
 
 0.999
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.999
rps-0
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.999
rps-29
Ribosomal Protein, Small subunit.
   
 0.999
rpl-29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.999
rpl-14
Ribosomal_L14e domain-containing protein.
   
 
 0.999
rpl-38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.999
rpl-19
60S ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.999
nbs-1
FHA domain-containing protein.
   
 
 0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.