STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C27A7.1Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1; Probable phosphodiesterase. (829 aa)    
Predicted Functional Partners:
C09D4.1
Uncharacterized MFS-type transporter C09D4.1; Belongs to the major facilitator superfamily. Feline leukemia virus subgroup C receptor (TC 2.A.1.28.1) family.
   
  
 0.818
marc-3
RING-CH-type domain-containing protein.
   
  
 0.810
F13H10.5
Uncharacterized protein.
  
  
  0.704
tag-30
BTB domain-containing protein.
      
 0.699
ZK795.3
Brix domain-containing protein ZK795.3.
      
 0.697
soap-1
Sorting Of Apical Proteins.
      
 0.667
hpo-9
BTB domain-containing protein.
      
 0.665
sqv-1
NAD(P)-bd_dom domain-containing protein.
     
 0.564
scp-1
SREBP Cleavage activating Protein (SCAP) homolog.
      
 0.549
did-2
Doa4-Independent Degradation, homologous to yeast Did2.
      
 0.538
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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