STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crh-2BZIP domain-containing protein. (351 aa)    
Predicted Functional Partners:
crh-1
BZIP domain-containing protein.
    
 
 0.902
ztf-18
C2H2-type domain-containing protein.
      
 0.692
pqn-21
C2H2-type domain-containing protein.
      
 0.615
athp-1
AT Hook plus PHD finger transcription factor.
      
 0.543
let-607
BZIP domain-containing protein.
  
 
0.477
vps-4
Related to yeast Vacuolar Protein Sorting factor; Belongs to the AAA ATPase family.
    
   0.471
tpk-1
Thiamin pyrophosphokinase 1; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate. Functions cell non-autonomously.
      
 0.463
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.