STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srb-3Serpentine receptor class beta-3; G-protein coupled receptor. (341 aa)    
Predicted Functional Partners:
srj-1
Serpentine Receptor, class J.
   
  
 0.666
msp-45
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142.
    
 
 0.625
F58A6.9
Major Sperm Protein.
    
 
 0.619
srh-2
Serpentine Receptor, class H.
      
 0.616
twk-4
TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
    0.615
sra-2
Serpentine receptor class alpha-2.
   
  
 0.610
sru-4
Serpentine Receptor, class U.
   
    0.592
C08B6.8
Probable oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides.
   
  
 0.585
F26A1.7
Uncharacterized protein.
   
    0.561
B0507.5
Uncharacterized protein.
   
    0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.