STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C27D9.2Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
F12A10.1
Uncharacterized protein.
      
 0.809
F39G3.4
Cytochrome b561 domain-containing protein.
   
  
 0.702
ugt-18
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.699
wrn-1
Probable Werner syndrome ATP-dependent helicase homolog 1; Essential for the formation of DNA replication focal centers; stably associates with foci elements generating binding sites for RP-A. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity. May be involved in the control of genomic stability (By similarity).
      
 0.693
mup-4
Transmembrane matrix receptor MUP-4; Required for junctional attachments between hypodermis and muscle, and between the apical epithelial surface and the cuticular matrix. Essential for enclosure of the embryo by the hypodermis, hypodermal integrity, embryo elongation, and maintenance of hypodermal morphology in fully elongated embryos.
      
 0.691
pes-8
Patterned Expression Site.
   
  
 0.667
F55H2.5
Putative cytochrome b561.
      
 0.660
F39G3.5
Cytochrome b561 domain-containing protein.
      
 0.581
nlp-32
Neuropeptide-like protein 32; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family.
      
 0.534
nas-3
Zinc metalloproteinase nas-3; Metalloprotease.
      
 0.532
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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