Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| col-36 | col-37 | C27H5.5c.1 | ZK863.2.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.902 |
| col-36 | col-45 | C27H5.5c.1 | F53G12.7a.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.538 |
| col-36 | col-8 | C27H5.5c.1 | F11H8.3.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.405 |
| col-36 | cut-1 | C27H5.5c.1 | C47G2.1.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.817 |
| col-36 | grd-4 | C27H5.5c.1 | T01B10.1.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.825 |
| col-36 | grl-20 | C27H5.5c.1 | C23H5.9.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.849 |
| col-36 | grl-3 | C27H5.5c.1 | K03B8.7.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.820 |
| col-36 | nhr-41 | C27H5.5c.1 | Y104H12A.1a.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Nuclear hormone receptor family member nhr-41; Orphan nuclear receptor that may have a role in dauer formation; Belongs to the nuclear hormone receptor family. | 0.748 |
| col-37 | col-36 | ZK863.2.1 | C27H5.5c.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.902 |
| col-45 | col-36 | F53G12.7a.1 | C27H5.5c.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.538 |
| col-8 | col-36 | F11H8.3.1 | C27H5.5c.1 | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.405 |
| cut-1 | col-36 | C47G2.1.1 | C27H5.5c.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.817 |
| cut-1 | grd-4 | C47G2.1.1 | T01B10.1.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Ground-like domain-containing protein. | 0.555 |
| cut-1 | grl-20 | C47G2.1.1 | C23H5.9.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Ground-like domain-containing protein. | 0.771 |
| cut-1 | grl-3 | C47G2.1.1 | K03B8.7.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Ground-like domain-containing protein. | 0.501 |
| grd-4 | col-36 | T01B10.1.1 | C27H5.5c.1 | Ground-like domain-containing protein. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.825 |
| grd-4 | cut-1 | T01B10.1.1 | C47G2.1.1 | Ground-like domain-containing protein. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.555 |
| grd-4 | grl-20 | T01B10.1.1 | C23H5.9.1 | Ground-like domain-containing protein. | Ground-like domain-containing protein. | 0.857 |
| grd-4 | grl-3 | T01B10.1.1 | K03B8.7.1 | Ground-like domain-containing protein. | Ground-like domain-containing protein. | 0.855 |
| grd-4 | nhr-41 | T01B10.1.1 | Y104H12A.1a.1 | Ground-like domain-containing protein. | Nuclear hormone receptor family member nhr-41; Orphan nuclear receptor that may have a role in dauer formation; Belongs to the nuclear hormone receptor family. | 0.677 |
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