Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| K07C5.2 | afmd-1 | K07C5.2.1 | D2024.2.1 | Aldo_ket_red domain-containing protein. | Abhydrolase_3 domain-containing protein. | 0.659 |
| K07C5.2 | arx-3 | K07C5.2.1 | Y79H2A.6b.1 | Aldo_ket_red domain-containing protein. | Actin-related protein 2/3 complex subunit. | 0.611 |
| K07C5.2 | glrx-5 | K07C5.2.1 | Y49E10.2.1 | Aldo_ket_red domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.624 |
| K07C5.2 | haf-2 | K07C5.2.1 | F43E2.4.1 | Aldo_ket_red domain-containing protein. | HAlF transporter (PGP related). | 0.571 |
| K07C5.2 | isw-1 | K07C5.2.1 | F37A4.8.1 | Aldo_ket_red domain-containing protein. | Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily. | 0.580 |
| K07C5.2 | mdt-29 | K07C5.2.1 | K08E3.8.1 | Aldo_ket_red domain-containing protein. | Mediator of RNA polymerase II transcription subunit 29; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.593 |
| K07C5.2 | pdxk-1 | K07C5.2.1 | F57C9.1b.1 | Aldo_ket_red domain-containing protein. | Putative pyridoxal kinase; Required for synthesis of pyridoxal-5-phosphate from vitamin B6. | 0.639 |
| K07C5.2 | rmd-2 | K07C5.2.1 | C27H6.4b.1 | Aldo_ket_red domain-containing protein. | TPR_REGION domain-containing protein. | 0.599 |
| K07C5.2 | ubxn-1 | K07C5.2.1 | F23C8.4.2 | Aldo_ket_red domain-containing protein. | UBX domain-containing protein 1; Ubiquitin-binding protein which acts as an adapter for ATPase cdc-48.1 and/or cdc-48.2, conferring substrate specificity. Together with ubxn-2 and ubxn-3, plays a role in hermaphrodite spermatogenesis probably by promoting the degradation of sex determination terminal factor tra-1. | 0.468 |
| afmd-1 | K07C5.2 | D2024.2.1 | K07C5.2.1 | Abhydrolase_3 domain-containing protein. | Aldo_ket_red domain-containing protein. | 0.659 |
| afmd-1 | arx-3 | D2024.2.1 | Y79H2A.6b.1 | Abhydrolase_3 domain-containing protein. | Actin-related protein 2/3 complex subunit. | 0.846 |
| afmd-1 | glrx-5 | D2024.2.1 | Y49E10.2.1 | Abhydrolase_3 domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.829 |
| afmd-1 | haf-2 | D2024.2.1 | F43E2.4.1 | Abhydrolase_3 domain-containing protein. | HAlF transporter (PGP related). | 0.587 |
| afmd-1 | isw-1 | D2024.2.1 | F37A4.8.1 | Abhydrolase_3 domain-containing protein. | Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily. | 0.600 |
| afmd-1 | mdt-29 | D2024.2.1 | K08E3.8.1 | Abhydrolase_3 domain-containing protein. | Mediator of RNA polymerase II transcription subunit 29; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.615 |
| afmd-1 | pdxk-1 | D2024.2.1 | F57C9.1b.1 | Abhydrolase_3 domain-containing protein. | Putative pyridoxal kinase; Required for synthesis of pyridoxal-5-phosphate from vitamin B6. | 0.548 |
| afmd-1 | rmd-2 | D2024.2.1 | C27H6.4b.1 | Abhydrolase_3 domain-containing protein. | TPR_REGION domain-containing protein. | 0.574 |
| afmd-1 | ubxn-1 | D2024.2.1 | F23C8.4.2 | Abhydrolase_3 domain-containing protein. | UBX domain-containing protein 1; Ubiquitin-binding protein which acts as an adapter for ATPase cdc-48.1 and/or cdc-48.2, conferring substrate specificity. Together with ubxn-2 and ubxn-3, plays a role in hermaphrodite spermatogenesis probably by promoting the degradation of sex determination terminal factor tra-1. | 0.461 |
| arx-3 | K07C5.2 | Y79H2A.6b.1 | K07C5.2.1 | Actin-related protein 2/3 complex subunit. | Aldo_ket_red domain-containing protein. | 0.611 |
| arx-3 | afmd-1 | Y79H2A.6b.1 | D2024.2.1 | Actin-related protein 2/3 complex subunit. | Abhydrolase_3 domain-containing protein. | 0.846 |
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