STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C28A5.1Uncharacterized protein. (1223 aa)    
Predicted Functional Partners:
T21F4.1
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.811
spds-1
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 0.809
aass-1
AminoAdipate-Semialdehyde Synthase homolog.
  
 
 0.799
C08F8.3
Uncharacterized protein.
   
  
 0.787
pyr-1
Glutamine-dependent carbamoyl-phosphate synthase; This protein is a 'fusion' protein encoding four enzymatic activities of the pyrimidine pathway (GATase, CPSase, ATCase and DHOase) (By similarity). Involved in the elongation of the pharyngeal isthmus during development, probably by providing precursors of UDP- sugars required for heparan sulfate proteoglycan biosynthesis. Regulates the organization of the actin and intermediate filaments cytoskeleton in the pharyngeal muscles ; In the central section; belongs to the metallo-dependent hydrolases superfamily. DHOase family. CAD subfamily.
  
 
 0.787
B0261.7
Uncharacterized protein.
   
  
 0.761
C01G8.1
Uncharacterized protein.
   
  
 0.759
C39E9.12
SAP domain-containing protein.
   
  
 0.756
C18E3.9
Uncharacterized protein.
   
  
 0.741
C48B4.11
Uncharacterized protein C48B4.11.
   
  
 0.741
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.