Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C28H8.3 | R10H10.7 | C28H8.3.1 | R10H10.7.1 | Uncharacterized helicase C28H8.3. | Uncharacterized protein. | 0.912 |
C28H8.3 | crn-3 | C28H8.3.1 | C14A4.4a.1 | Uncharacterized helicase C28H8.3. | HRDC domain-containing protein. | 0.846 |
C28H8.3 | exos-1 | C28H8.3.1 | Y48A6B.5.1 | Uncharacterized helicase C28H8.3. | ECR1_N domain-containing protein. | 0.765 |
C28H8.3 | exos-7 | C28H8.3.1 | F31D4.1.1 | Uncharacterized helicase C28H8.3. | RNase_PH domain-containing protein. | 0.759 |
C28H8.3 | exos-9 | C28H8.3.1 | F37C12.13a.2 | Uncharacterized helicase C28H8.3. | EXOSome (Multiexonuclease complex) component. | 0.793 |
C28H8.3 | imb-1 | C28H8.3.1 | F28B3.8.1 | Uncharacterized helicase C28H8.3. | Importin N-terminal domain-containing protein. | 0.759 |
C28H8.3 | rps-30 | C28H8.3.1 | C26F1.4.3 | Uncharacterized helicase C28H8.3. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.988 |
C28H8.3 | ruvb-1 | C28H8.3.1 | C27H6.2.1 | Uncharacterized helicase C28H8.3. | RuvB-like 1; Possesses single-stranded DNA-stimulated ATPase and ATP dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Involved in the Ce- Tor signaling pathway whereby it i [...] | 0.805 |
C28H8.3 | ruvb-2 | C28H8.3.1 | T22D1.10.1 | Uncharacterized helicase C28H8.3. | RuvB-like 2; Possesses single-stranded DNA-stimulated ATPase and ATP- dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Has a role in gonadal development. Involved in the en [...] | 0.798 |
C28H8.3 | ttc-37 | C28H8.3.1 | Y47A7.1.1 | Uncharacterized helicase C28H8.3. | TeTratriCopeptide repeat domain protein related. | 0.836 |
R10H10.7 | C28H8.3 | R10H10.7.1 | C28H8.3.1 | Uncharacterized protein. | Uncharacterized helicase C28H8.3. | 0.912 |
R10H10.7 | ruvb-1 | R10H10.7.1 | C27H6.2.1 | Uncharacterized protein. | RuvB-like 1; Possesses single-stranded DNA-stimulated ATPase and ATP dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Involved in the Ce- Tor signaling pathway whereby it i [...] | 0.991 |
R10H10.7 | ruvb-2 | R10H10.7.1 | T22D1.10.1 | Uncharacterized protein. | RuvB-like 2; Possesses single-stranded DNA-stimulated ATPase and ATP- dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Has a role in gonadal development. Involved in the en [...] | 0.987 |
crn-3 | C28H8.3 | C14A4.4a.1 | C28H8.3.1 | HRDC domain-containing protein. | Uncharacterized helicase C28H8.3. | 0.846 |
crn-3 | exos-1 | C14A4.4a.1 | Y48A6B.5.1 | HRDC domain-containing protein. | ECR1_N domain-containing protein. | 0.997 |
crn-3 | exos-7 | C14A4.4a.1 | F31D4.1.1 | HRDC domain-containing protein. | RNase_PH domain-containing protein. | 0.997 |
crn-3 | exos-9 | C14A4.4a.1 | F37C12.13a.2 | HRDC domain-containing protein. | EXOSome (Multiexonuclease complex) component. | 0.997 |
crn-3 | imb-1 | C14A4.4a.1 | F28B3.8.1 | HRDC domain-containing protein. | Importin N-terminal domain-containing protein. | 0.918 |
crn-3 | ttc-37 | C14A4.4a.1 | Y47A7.1.1 | HRDC domain-containing protein. | TeTratriCopeptide repeat domain protein related. | 0.669 |
exos-1 | C28H8.3 | Y48A6B.5.1 | C28H8.3.1 | ECR1_N domain-containing protein. | Uncharacterized helicase C28H8.3. | 0.765 |
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