STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pph-2Protein PHosphatase. (430 aa)    
Predicted Functional Partners:
acs-18
AMP-binding domain-containing protein.
   
    0.522
C18H7.4
Tyrosine-protein kinase.
   
   0.514
F47B3.1
Tyrosine-protein phosphatase.
   
   
0.513
kin-5
Tyrosine-protein kinase.
   
   0.504
BE10.1
Uncharacterized protein.
   
    0.502
spe-8
Spermatocyte protein spe-8; Probable non-receptor tyrosine-protein kinase which plays a role in spermatid activation (spermiogenesis) in hermaphrodites.
   
   0.501
kin-26
Tyrosine-protein kinase.
   
   0.500
Y57G11A.2
Uncharacterized protein.
   
   0.492
C39H7.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.491
T25B9.4
Tyrosine-protein kinase.
   
   0.489
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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