STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C29F3.7CUB_2 domain-containing protein. (491 aa)    
Predicted Functional Partners:
Y42A5A.3
Uncharacterized protein.
   
  
 0.767
clec-67
C-type lectin domain-containing protein.
   
  
 0.763
irg-4
CUB_2 domain-containing protein.
   
  
 0.761
abf-1
Antibacterial factor-related peptide 1.
      
 0.758
lys-1
Lysozyme-like protein 1; Involved in resistance to Gram-negative bacterium S.marcescens and to bacterium Gram-positive S.aureus infection.
   
  
 0.734
C14C6.5
Uncharacterized protein.
   
  
 0.713
clec-166
C-type lectin domain-containing protein.
   
  
 0.704
abu-12
Activated in Blocked Unfolded protein response.
      
 0.695
mul-1
Mucin Like protein.
   
  
 0.681
irg-1
DUF1768 domain-containing protein.
   
  
 0.670
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.