STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lntl-1LIN-24 (Twenty-four) Like. (302 aa)    
Predicted Functional Partners:
F25H9.6
Flavoprotein domain-containing protein.
   
 
 0.887
Y71H2AM.6
Uncharacterized protein.
   
 
 0.887
cdd-1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.829
cdd-2
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
    
  0.819
T05G5.5
Uncharacterized protein T05G5.5; Belongs to the CoaE family.
     
 0.708
F08F8.7
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
  0.575
cpna-5
Copine family protein 5.
   
    0.536
F44E2.8
Uncharacterized protein F44E2.8.
     
 0.524
JC8.4
CMP/dCMP-type deaminase domain-containing protein.
     
 0.524
R13A5.10
CMP/dCMP-type deaminase domain-containing protein.
     
 0.524
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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