Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C27D9.1 | C31H1.8 | C27D9.1.1 | C31H1.8a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
C31H1.8 | C27D9.1 | C31H1.8a.1 | C27D9.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
C31H1.8 | R148.7 | C31H1.8a.1 | R148.7.1 | Uncharacterized protein. | Uncharacterized protein. | 0.818 |
C31H1.8 | Y45G5AM.2 | C31H1.8a.1 | Y45G5AM.2a.1 | Uncharacterized protein. | Uncharacterized protein; Belongs to the peptidase M24B family. | 0.574 |
C31H1.8 | ctn-1 | C31H1.8a.1 | Y23H5A.5a.1 | Uncharacterized protein. | Alpha-CaTuliN (Catenin/vinculin related). | 0.808 |
C31H1.8 | hcp-3 | C31H1.8a.1 | F58A4.3.1 | Uncharacterized protein. | Histone H3-like centromeric protein hcp-3; Histone H3-like variant which exclusively replaces conventional H3 in the nucleosome core of centromeric chromatin at the inner plate of the kinetochore. Required for recruitment and assembly of kinetochore proteins, mitotic progression and chromosome segregation. May serve as an epigenetic mark that propagates centromere identity through replication and cell division (By similarity). Might promote cleavage furrow stability during cytokinesis. Not required for chromosome segregation during meiosis. | 0.751 |
C31H1.8 | him-10 | C31H1.8a.1 | R12B2.4.1 | Uncharacterized protein. | Kinetochore protein Nuf2 homolog; Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation in mitosis and meiosis and spindle checkpoint activity. The ndc-80 complex synergistically enhances the affinity of the ska-1 complex for microtubules and may allow the ndc-80 complex to track depolymerizing microtubules. Belongs to the NUF2 family. | 0.832 |
C31H1.8 | hrde-1 | C31H1.8a.1 | C16C10.3.1 | Uncharacterized protein. | Uncharacterized protein C16C10.3. | 0.592 |
C31H1.8 | ify-1 | C31H1.8a.1 | C27A2.3.2 | Uncharacterized protein. | Securin-like protein; Acts as a chaperone and as an inhibitor for separase sep-1. Plays an essential role in maintaining chromosome cohesion prior to meiotic and mitotic anaphase, in cytokinesis and in organizing the spindle and the centrosome. Ubiquitination-dependent degradation at the onset of anaphase is likely to activate sep-1 resulting in the proteolysis of the cohesin complex and the subsequent segregation of the chromosomes. Also required for cortical granule exocytosis. | 0.849 |
C31H1.8 | perm-5 | C31H1.8a.1 | C55C3.5.1 | Uncharacterized protein. | PERMeable eggshell. | 0.919 |
C31H1.8 | rnp-8 | C31H1.8a.1 | R119.7a.1 | Uncharacterized protein. | RRM domain-containing protein. | 0.592 |
R148.7 | C31H1.8 | R148.7.1 | C31H1.8a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.818 |
R148.7 | ctn-1 | R148.7.1 | Y23H5A.5a.1 | Uncharacterized protein. | Alpha-CaTuliN (Catenin/vinculin related). | 0.461 |
R148.7 | him-10 | R148.7.1 | R12B2.4.1 | Uncharacterized protein. | Kinetochore protein Nuf2 homolog; Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation in mitosis and meiosis and spindle checkpoint activity. The ndc-80 complex synergistically enhances the affinity of the ska-1 complex for microtubules and may allow the ndc-80 complex to track depolymerizing microtubules. Belongs to the NUF2 family. | 0.420 |
R148.7 | ify-1 | R148.7.1 | C27A2.3.2 | Uncharacterized protein. | Securin-like protein; Acts as a chaperone and as an inhibitor for separase sep-1. Plays an essential role in maintaining chromosome cohesion prior to meiotic and mitotic anaphase, in cytokinesis and in organizing the spindle and the centrosome. Ubiquitination-dependent degradation at the onset of anaphase is likely to activate sep-1 resulting in the proteolysis of the cohesin complex and the subsequent segregation of the chromosomes. Also required for cortical granule exocytosis. | 0.465 |
R148.7 | perm-5 | R148.7.1 | C55C3.5.1 | Uncharacterized protein. | PERMeable eggshell. | 0.740 |
Y45G5AM.2 | C31H1.8 | Y45G5AM.2a.1 | C31H1.8a.1 | Uncharacterized protein; Belongs to the peptidase M24B family. | Uncharacterized protein. | 0.574 |
Y45G5AM.2 | hrde-1 | Y45G5AM.2a.1 | C16C10.3.1 | Uncharacterized protein; Belongs to the peptidase M24B family. | Uncharacterized protein C16C10.3. | 0.694 |
Y45G5AM.2 | rnp-8 | Y45G5AM.2a.1 | R119.7a.1 | Uncharacterized protein; Belongs to the peptidase M24B family. | RRM domain-containing protein. | 0.519 |
ctn-1 | C31H1.8 | Y23H5A.5a.1 | C31H1.8a.1 | Alpha-CaTuliN (Catenin/vinculin related). | Uncharacterized protein. | 0.808 |
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