Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dmd-11 | dmd-4 | C34D1.2.1 | C27C12.6.1 | DM domain-containing protein. | DM domain-containing protein. | 0.792 |
| dmd-11 | dmd-5 | C34D1.2.1 | F10C1.5.1 | DM domain-containing protein. | DM domain-containing protein. | 0.932 |
| dmd-11 | mab-23 | C34D1.2.1 | C32C4.5a.1 | DM domain-containing protein. | Putative transcription factor MAB-23. | 0.850 |
| dmd-4 | dmd-11 | C27C12.6.1 | C34D1.2.1 | DM domain-containing protein. | DM domain-containing protein. | 0.792 |
| dmd-4 | dmd-5 | C27C12.6.1 | F10C1.5.1 | DM domain-containing protein. | DM domain-containing protein. | 0.566 |
| dmd-4 | mab-23 | C27C12.6.1 | C32C4.5a.1 | DM domain-containing protein. | Putative transcription factor MAB-23. | 0.665 |
| dmd-4 | mab-3 | C27C12.6.1 | Y53C12B.5a.1 | DM domain-containing protein. | Protein male abnormal 3; Transcription factor which binds the DNA motif 5'- [CGA][TCA][TA]ACAATGT[AT][TGA]C-3', probably as a monomer. Acts partially redundantly with the transcription factor dmd-3 to coordinate tail tip cell fusion and retraction and thereby regulate male tail tip morphogenesis. Promotes male-specific development of two tissues, the peripheral nervous system and the intestine. In the peripheral nervous system, directs differentiation of sensory ray neuroblasts into peripheral sense organs. In the intestine, causes repression of vitellogenin gene transcription. | 0.431 |
| dmd-5 | dmd-11 | F10C1.5.1 | C34D1.2.1 | DM domain-containing protein. | DM domain-containing protein. | 0.932 |
| dmd-5 | dmd-4 | F10C1.5.1 | C27C12.6.1 | DM domain-containing protein. | DM domain-containing protein. | 0.566 |
| dmd-5 | mab-23 | F10C1.5.1 | C32C4.5a.1 | DM domain-containing protein. | Putative transcription factor MAB-23. | 0.847 |
| dmd-5 | mab-3 | F10C1.5.1 | Y53C12B.5a.1 | DM domain-containing protein. | Protein male abnormal 3; Transcription factor which binds the DNA motif 5'- [CGA][TCA][TA]ACAATGT[AT][TGA]C-3', probably as a monomer. Acts partially redundantly with the transcription factor dmd-3 to coordinate tail tip cell fusion and retraction and thereby regulate male tail tip morphogenesis. Promotes male-specific development of two tissues, the peripheral nervous system and the intestine. In the peripheral nervous system, directs differentiation of sensory ray neuroblasts into peripheral sense organs. In the intestine, causes repression of vitellogenin gene transcription. | 0.467 |
| egl-5 | lin-32 | C08C3.1b.1 | T14F9.5.1 | Homeobox protein egl-5; Essential for the determination of specific neurons. | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | 0.725 |
| egl-5 | mab-23 | C08C3.1b.1 | C32C4.5a.1 | Homeobox protein egl-5; Essential for the determination of specific neurons. | Putative transcription factor MAB-23. | 0.660 |
| egl-5 | mab-3 | C08C3.1b.1 | Y53C12B.5a.1 | Homeobox protein egl-5; Essential for the determination of specific neurons. | Protein male abnormal 3; Transcription factor which binds the DNA motif 5'- [CGA][TCA][TA]ACAATGT[AT][TGA]C-3', probably as a monomer. Acts partially redundantly with the transcription factor dmd-3 to coordinate tail tip cell fusion and retraction and thereby regulate male tail tip morphogenesis. Promotes male-specific development of two tissues, the peripheral nervous system and the intestine. In the peripheral nervous system, directs differentiation of sensory ray neuroblasts into peripheral sense organs. In the intestine, causes repression of vitellogenin gene transcription. | 0.549 |
| lin-32 | egl-5 | T14F9.5.1 | C08C3.1b.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Homeobox protein egl-5; Essential for the determination of specific neurons. | 0.725 |
| lin-32 | mab-23 | T14F9.5.1 | C32C4.5a.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Putative transcription factor MAB-23. | 0.661 |
| lin-32 | mab-3 | T14F9.5.1 | Y53C12B.5a.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Protein male abnormal 3; Transcription factor which binds the DNA motif 5'- [CGA][TCA][TA]ACAATGT[AT][TGA]C-3', probably as a monomer. Acts partially redundantly with the transcription factor dmd-3 to coordinate tail tip cell fusion and retraction and thereby regulate male tail tip morphogenesis. Promotes male-specific development of two tissues, the peripheral nervous system and the intestine. In the peripheral nervous system, directs differentiation of sensory ray neuroblasts into peripheral sense organs. In the intestine, causes repression of vitellogenin gene transcription. | 0.699 |
| lin-32 | nhr-113 | T14F9.5.1 | ZK1025.9.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Nuclear Hormone Receptor family. | 0.416 |
| mab-21 | mab-23 | F35G12.6.1 | C32C4.5a.1 | Protein male abnormal 21; Acts in a cell autonomous fashion to specify the properties of the sensory ray and non-autonomously in the choice of hypodermal versus neuroblast cell fate. Belongs to the mab-21 family. | Putative transcription factor MAB-23. | 0.660 |
| mab-23 | dmd-11 | C32C4.5a.1 | C34D1.2.1 | Putative transcription factor MAB-23. | DM domain-containing protein. | 0.850 |
page 1 of 3