STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C32E8.6AMP-binding domain-containing protein. (461 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.988
C24A3.4
Uncharacterized protein.
  
 
 0.962
nrps-1
NonRibosomal Peptide Synthetase.
  
 0.961
Y71H2B.1
ACB domain-containing protein.
      
 0.931
acp-7
ACid Phosphatase family; Belongs to the histidine acid phosphatase family.
      
 0.920
npp-11
Nuclear Pore complex Protein.
   
 
 0.906
F49C12.10
Methyltransf_11 domain-containing protein.
      
 0.851
acp-1
Putative acid phosphatase 1; Belongs to the histidine acid phosphatase family.
      
 0.809
dhs-6
SCP2 domain-containing protein.
  
 0.777
W09D6.1
AMP-binding domain-containing protein.
  
 0.731
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.