STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C32H11.9CUB_2 domain-containing protein. (369 aa)    
Predicted Functional Partners:
pud-2.2
Protein Up-regulated in Daf-2(Gf).
      
 0.850
C45B11.6
Epoxide hydrolase.
      
 0.807
dct-17
CUB_2 domain-containing protein.
   
  
 0.718
W01A11.1
Epoxide hydrolase.
      
 0.700
pud-2.1
Protein Up-regulated in Daf-2(Gf).
      
 0.697
pud-1.1
PUD1_2 domain-containing protein.
      
 0.668
dod-23
Downstream Of DAF-16 (Regulated by DAF-16).
      
 0.666
sid-3
Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues.
      
 0.660
C49H3.4
Sm domain-containing protein.
      
 0.463
K07A1.15
Sm domain-containing protein.
      
 0.463
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.