STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sru-4Serpentine Receptor, class U. (339 aa)    
Predicted Functional Partners:
F38B6.4
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.801
srb-3
Serpentine receptor class beta-3; G-protein coupled receptor.
   
    0.592
srx-74
Serpentine Receptor, class X.
   
    0.592
srx-90
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.592
twk-4
TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
    0.592
fbxb-55
F-box B protein.
   
    0.591
math-6
MATH (Meprin-associated Traf homology) domain containing.
   
    0.571
srsx-2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.568
sru-37
Serpentine Receptor, class U.
   
   
0.566
str-9
Seven TM Receptor.
   
    0.566
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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