Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F20D12.2 | ceh-31 | F20D12.2.2 | C33D12.1.1 | PCI domain-containing protein. | Homeobox protein ceh-31. | 0.465 |
ceh-31 | F20D12.2 | C33D12.1.1 | F20D12.2.2 | Homeobox protein ceh-31. | PCI domain-containing protein. | 0.465 |
ceh-31 | ceh-54 | C33D12.1.1 | T13C5.4.1 | Homeobox protein ceh-31. | Homeobox domain-containing protein. | 0.461 |
ceh-31 | ceh-60 | C33D12.1.1 | F22A3.5.1 | Homeobox protein ceh-31. | Homeobox domain-containing protein. | 0.564 |
ceh-31 | ceh-87 | C33D12.1.1 | F34D6.2.1 | Homeobox protein ceh-31. | Homeobox domain-containing protein. | 0.697 |
ceh-31 | ceh-93 | C33D12.1.1 | R04A9.5.1 | Homeobox protein ceh-31. | Homeobox domain-containing protein. | 0.708 |
ceh-31 | egrh-2 | C33D12.1.1 | Y55F3AM.7b.1 | Homeobox protein ceh-31. | EGR (Early Growth factor Response factor) Homolog. | 0.813 |
ceh-31 | hlh-19 | C33D12.1.1 | F57C12.3.1 | Homeobox protein ceh-31. | BHLH domain-containing protein. | 0.718 |
ceh-31 | lim-7 | C33D12.1.1 | C04F1.3.1 | Homeobox protein ceh-31. | LIM domain family. | 0.490 |
ceh-31 | tbx-8 | C33D12.1.1 | T07C4.2.1 | Homeobox protein ceh-31. | T-box transcription factor tbx-8; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-9. | 0.532 |
ceh-31 | tbx-9 | C33D12.1.1 | T07C4.6.1 | Homeobox protein ceh-31. | T-box transcription factor tbx-9; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-8. | 0.605 |
ceh-54 | ceh-31 | T13C5.4.1 | C33D12.1.1 | Homeobox domain-containing protein. | Homeobox protein ceh-31. | 0.461 |
ceh-54 | tbx-9 | T13C5.4.1 | T07C4.6.1 | Homeobox domain-containing protein. | T-box transcription factor tbx-9; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-8. | 0.474 |
ceh-60 | ceh-31 | F22A3.5.1 | C33D12.1.1 | Homeobox domain-containing protein. | Homeobox protein ceh-31. | 0.564 |
ceh-60 | egrh-2 | F22A3.5.1 | Y55F3AM.7b.1 | Homeobox domain-containing protein. | EGR (Early Growth factor Response factor) Homolog. | 0.660 |
ceh-60 | hlh-19 | F22A3.5.1 | F57C12.3.1 | Homeobox domain-containing protein. | BHLH domain-containing protein. | 0.438 |
ceh-87 | ceh-31 | F34D6.2.1 | C33D12.1.1 | Homeobox domain-containing protein. | Homeobox protein ceh-31. | 0.697 |
ceh-87 | ceh-93 | F34D6.2.1 | R04A9.5.1 | Homeobox domain-containing protein. | Homeobox domain-containing protein. | 0.697 |
ceh-87 | egrh-2 | F34D6.2.1 | Y55F3AM.7b.1 | Homeobox domain-containing protein. | EGR (Early Growth factor Response factor) Homolog. | 0.758 |
ceh-87 | hlh-19 | F34D6.2.1 | F57C12.3.1 | Homeobox domain-containing protein. | BHLH domain-containing protein. | 0.691 |
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