Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C52B11.5 | ccz-1 | C52B11.5.1 | F58G11.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.478 |
C52B11.5 | gdi-1 | C52B11.5.1 | Y57G11C.10b.1 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.843 |
C52B11.5 | rab-33 | C52B11.5.1 | F43D9.2.1 | Uncharacterized protein. | Ras-related protein Rab-33. | 0.423 |
C52B11.5 | rsef-1 | C52B11.5.1 | C33D12.6.1 | Uncharacterized protein. | Ras and EF-hand domain-containing protein homolog; Binds GTP and GDP (By similarity). Plays a role in uterine seam cell development. | 0.574 |
C52B11.5 | vps-16 | C52B11.5.1 | C05D11.2.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to rab-7 on the la [...] | 0.758 |
F54C9.11 | gdi-1 | F54C9.11.1 | Y57G11C.10b.1 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.610 |
F54C9.11 | mdt-9 | F54C9.11.1 | Y62E10A.11.1 | Uncharacterized protein. | Putative guanine nucleotide exchange factor MSS4 homolog; Guanine-nucleotide-releasing protein that acts on members of the sec4/ypt1/rab subfamily. | 0.758 |
F54C9.11 | rsef-1 | F54C9.11.1 | C33D12.6.1 | Uncharacterized protein. | Ras and EF-hand domain-containing protein homolog; Binds GTP and GDP (By similarity). Plays a role in uterine seam cell development. | 0.567 |
F54C9.11 | sec-15 | F54C9.11.1 | C28G1.3.1 | Uncharacterized protein. | Exocyst complex component 6; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC15 family. | 0.933 |
ZK669.5 | rsef-1 | ZK669.5a.1 | C33D12.6.1 | Uncharacterized protein. | Ras and EF-hand domain-containing protein homolog; Binds GTP and GDP (By similarity). Plays a role in uterine seam cell development. | 0.737 |
ccz-1 | C52B11.5 | F58G11.6.1 | C52B11.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.478 |
ccz-1 | gdi-1 | F58G11.6.1 | Y57G11C.10b.1 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.770 |
ccz-1 | mdt-9 | F58G11.6.1 | Y62E10A.11.1 | Uncharacterized protein. | Putative guanine nucleotide exchange factor MSS4 homolog; Guanine-nucleotide-releasing protein that acts on members of the sec4/ypt1/rab subfamily. | 0.536 |
ccz-1 | rsef-1 | F58G11.6.1 | C33D12.6.1 | Uncharacterized protein. | Ras and EF-hand domain-containing protein homolog; Binds GTP and GDP (By similarity). Plays a role in uterine seam cell development. | 0.491 |
ccz-1 | vps-16 | F58G11.6.1 | C05D11.2.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to rab-7 on the la [...] | 0.991 |
gdi-1 | C52B11.5 | Y57G11C.10b.1 | C52B11.5.1 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.843 |
gdi-1 | F54C9.11 | Y57G11C.10b.1 | F54C9.11.1 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.610 |
gdi-1 | ccz-1 | Y57G11C.10b.1 | F58G11.6.1 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.770 |
gdi-1 | rab-33 | Y57G11C.10b.1 | F43D9.2.1 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-33. | 0.748 |
gdi-1 | rsef-1 | Y57G11C.10b.1 | C33D12.6.1 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras and EF-hand domain-containing protein homolog; Binds GTP and GDP (By similarity). Plays a role in uterine seam cell development. | 0.574 |
page 1 of 3