STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C33G3.4Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. (900 aa)    
Predicted Functional Partners:
aman-1
Alpha-mannosidase.
   
 
 0.877
sul-3
Sulfatase domain-containing protein.
  
 
 0.850
Y49F6B.8
Uncharacterized protein.
     
 0.817
W04G5.9
PAW domain-containing protein.
   
  
 0.812
cutl-6
ZP domain-containing protein.
      
 0.810
pps-1
3'-Phosphoadenosine 5'-Phosphosulfate Synthetase.
     
 0.809
cln-3.2
Battenin.
      
 0.808
srxa-19
7TM_GPCR_Srx domain-containing protein.
      
 0.808
D1054.10
Uncharacterized protein.
      
 0.808
cln-3.1
Battenin.
      
 0.808
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.