STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srab-4Serpentine Receptor, class AB (Class A-like). (328 aa)    
Predicted Functional Partners:
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
      
 0.667
C18H7.6
Uncharacterized protein.
   
  
 0.666
C42D4.1
DUF148 domain-containing protein.
      
 0.660
T09B9.3
Uncharacterized protein T09B9.3.
   
  
 0.550
vab-7
Homeobox protein vab-7; Required for posterior-specific pattern formation in the embryo and may have a role in regulating egl-5 expression.
      
 0.532
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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