STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntp-1Nucleoside-triphosphatase ntp-1; Seems to be able to hydrolyze CTP, ATP and UTP. (543 aa)    
Predicted Functional Partners:
Y48G8AL.7
Uncharacterized protein.
   
  
 0.854
R04E5.8
Uncharacterized protein.
   
 
 0.853
F18E9.3
Uncharacterized protein.
      
 0.850
R04E5.7
Uncharacterized protein.
      
 0.850
T07F12.4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.850
Y55F3BR.6
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.850
ssq-3
Sperm-Specific family, class Q.
      
 0.850
Y43H11AL.1
PHD-type domain-containing protein.
    
 
 0.816
ugt-5
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.740
atic-1
MGS domain-containing protein.
      
 0.708
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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