Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aph-1 | dif-1 | VF36H2L.1.1 | F49E8.5.3 | Gamma-secretase subunit aph-1; Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors (lin-12 or glp-1). It may represent a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex. Required for the localization of aph-2. | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | 0.703 |
| aph-1 | nuaf-3 | VF36H2L.1.1 | R07H5.3a.2 | Gamma-secretase subunit aph-1; Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors (lin-12 or glp-1). It may represent a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex. Required for the localization of aph-2. | NADH:Ubiquinone oxidoreductase Assembly Factor. | 0.483 |
| aph-1 | zgpa-1 | VF36H2L.1.1 | C33H5.17.1 | Gamma-secretase subunit aph-1; Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors (lin-12 or glp-1). It may represent a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex. Required for the localization of aph-2. | Zinc finger G-PAtch domain-containing protein homolog. | 0.706 |
| dif-1 | aph-1 | F49E8.5.3 | VF36H2L.1.1 | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | Gamma-secretase subunit aph-1; Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors (lin-12 or glp-1). It may represent a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex. Required for the localization of aph-2. | 0.703 |
| dif-1 | nduf-6 | F49E8.5.3 | F22D6.4.2 | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | 0.436 |
| dif-1 | nuaf-3 | F49E8.5.3 | R07H5.3a.2 | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | NADH:Ubiquinone oxidoreductase Assembly Factor. | 0.568 |
| dif-1 | zgpa-1 | F49E8.5.3 | C33H5.17.1 | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | Zinc finger G-PAtch domain-containing protein homolog. | 0.877 |
| dnj-11 | hmbx-1 | F38A5.13.1 | F54A5.1.1 | DNaJ domain (Prokaryotic heat shock protein). | Homeobox domain-containing protein. | 0.536 |
| dnj-11 | nduf-6 | F38A5.13.1 | F22D6.4.2 | DNaJ domain (Prokaryotic heat shock protein). | Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | 0.426 |
| dnj-11 | somi-1 | F38A5.13.1 | M04G12.4a.1 | DNaJ domain (Prokaryotic heat shock protein). | Suppressor of Overexpressed MIcro-RNA. | 0.511 |
| dnj-11 | sup-37 | F38A5.13.1 | C01B7.1c.1 | DNaJ domain (Prokaryotic heat shock protein). | SUPpressor. | 0.554 |
| dnj-11 | zgpa-1 | F38A5.13.1 | C33H5.17.1 | DNaJ domain (Prokaryotic heat shock protein). | Zinc finger G-PAtch domain-containing protein homolog. | 0.753 |
| hmbx-1 | dnj-11 | F54A5.1.1 | F38A5.13.1 | Homeobox domain-containing protein. | DNaJ domain (Prokaryotic heat shock protein). | 0.536 |
| hmbx-1 | somi-1 | F54A5.1.1 | M04G12.4a.1 | Homeobox domain-containing protein. | Suppressor of Overexpressed MIcro-RNA. | 0.463 |
| hmbx-1 | sup-37 | F54A5.1.1 | C01B7.1c.1 | Homeobox domain-containing protein. | SUPpressor. | 0.536 |
| hmbx-1 | zgpa-1 | F54A5.1.1 | C33H5.17.1 | Homeobox domain-containing protein. | Zinc finger G-PAtch domain-containing protein homolog. | 0.699 |
| marc-6 | prp-3 | F55A3.1.1 | M03C11.7.1 | RING-CH-type domain-containing protein. | Yeast PRP (Splicing factor) related. | 0.468 |
| marc-6 | zgpa-1 | F55A3.1.1 | C33H5.17.1 | RING-CH-type domain-containing protein. | Zinc finger G-PAtch domain-containing protein homolog. | 0.743 |
| nduf-6 | dif-1 | F22D6.4.2 | F49E8.5.3 | Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | Protein dif-1; Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation. | 0.436 |
| nduf-6 | dnj-11 | F22D6.4.2 | F38A5.13.1 | Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | DNaJ domain (Prokaryotic heat shock protein). | 0.426 |
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