Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C34C12.6 | K02E10.4 | C34C12.6.1 | K02E10.4b.1 | CRAL-TRIO domain-containing protein C34C12.6. | Uncharacterized protein. | 0.408 |
C34C12.6 | dpy-2 | C34C12.6.1 | T14B4.6.1 | CRAL-TRIO domain-containing protein C34C12.6. | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | 0.406 |
C34C12.6 | ptr-15 | C34C12.6.1 | T07H8.6.2 | CRAL-TRIO domain-containing protein C34C12.6. | SSD domain-containing protein. | 0.408 |
K02E10.4 | C34C12.6 | K02E10.4b.1 | C34C12.6.1 | Uncharacterized protein. | CRAL-TRIO domain-containing protein C34C12.6. | 0.408 |
K02E10.4 | dpy-2 | K02E10.4b.1 | T14B4.6.1 | Uncharacterized protein. | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | 0.720 |
dpy-2 | C34C12.6 | T14B4.6.1 | C34C12.6.1 | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | CRAL-TRIO domain-containing protein C34C12.6. | 0.406 |
dpy-2 | K02E10.4 | T14B4.6.1 | K02E10.4b.1 | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | Uncharacterized protein. | 0.720 |
ptr-15 | C34C12.6 | T07H8.6.2 | C34C12.6.1 | SSD domain-containing protein. | CRAL-TRIO domain-containing protein C34C12.6. | 0.408 |