Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R12E2.15 | R12E2.7 | R12E2.15.1 | R12E2.7.2 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
R12E2.15 | col-104 | R12E2.15.1 | F58F6.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.846 |
R12E2.15 | col-109 | R12E2.15.1 | Y38C1BA.3.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.545 |
R12E2.15 | col-113 | R12E2.15.1 | C34D4.15a.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.536 |
R12E2.15 | col-14 | R12E2.15.1 | C46A5.3a.1 | Uncharacterized protein. | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.599 |
R12E2.15 | col-48 | R12E2.15.1 | Y54E10BL.2.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.592 |
R12E2.15 | col-58 | R12E2.15.1 | F26B1.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.565 |
R12E2.15 | col-77 | R12E2.15.1 | M195.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.546 |
R12E2.15 | col-97 | R12E2.15.1 | ZK1010.7.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.615 |
R12E2.7 | R12E2.15 | R12E2.7.2 | R12E2.15.1 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
R12E2.7 | col-104 | R12E2.7.2 | F58F6.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.610 |
R12E2.7 | col-109 | R12E2.7.2 | Y38C1BA.3.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.592 |
R12E2.7 | col-113 | R12E2.7.2 | C34D4.15a.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.528 |
R12E2.7 | col-14 | R12E2.7.2 | C46A5.3a.1 | Uncharacterized protein. | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.627 |
R12E2.7 | col-48 | R12E2.7.2 | Y54E10BL.2.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.592 |
R12E2.7 | col-58 | R12E2.7.2 | F26B1.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.592 |
R12E2.7 | col-77 | R12E2.7.2 | M195.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.565 |
R12E2.7 | col-97 | R12E2.7.2 | ZK1010.7.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.688 |
col-104 | R12E2.15 | F58F6.1.1 | R12E2.15.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.846 |
col-104 | R12E2.7 | F58F6.1.1 | R12E2.7.2 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.610 |
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