Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C16C10.2 | C34E10.10 | C16C10.2.1 | C34E10.10.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Uncharacterized protein. | 0.889 |
C16C10.2 | C48B6.2 | C16C10.2.1 | C48B6.2.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Putative 40S ribosomal protein S4-like. | 0.993 |
C16C10.2 | F27C1.6 | C16C10.2.1 | F27C1.6.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Uncharacterized protein. | 0.992 |
C16C10.2 | T10B5.3 | C16C10.2.1 | T10B5.3a.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Utp12 domain-containing protein. | 0.974 |
C16C10.2 | Y39A1A.14 | C16C10.2.1 | Y39A1A.14.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Ribosomal RNA small subunit methyltransferase nep-1; S-adenosyl-L-methionine-dependent pseudouridine N(1)- methyltransferase that methylates a pseudouridine in 18S rRNA. Involved the biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3- carboxypropyl) pseudouridine (m1acp3-Psi) conserved in eukaryotic 18S rRNA. Has also an essential role in 40S ribosomal subunit biogenesis independent on its methyltransferase activity, facilitating the incorporation of ribosomal protein S19 during the formation of pre- ribosomes; Belongs to the class IV-like SAM-binding methyltransferase superfami [...] | 0.991 |
C16C10.2 | ZK430.7 | C16C10.2.1 | ZK430.7.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD_REPEATS_REGION domain-containing protein. | 0.994 |
C16C10.2 | ZK795.3 | C16C10.2.1 | ZK795.3.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Brix domain-containing protein ZK795.3. | 0.995 |
C16C10.2 | krr-1 | C16C10.2.1 | C05C8.2.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
C16C10.2 | lpd-2 | C16C10.2.1 | C48E7.3.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | LiPid Depleted. | 0.997 |
C16C10.2 | wdr-46 | C16C10.2.1 | F28D1.1.2 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
C34E10.10 | C16C10.2 | C34E10.10.1 | C16C10.2.1 | Uncharacterized protein. | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.889 |
C34E10.10 | C48B6.2 | C34E10.10.1 | C48B6.2.1 | Uncharacterized protein. | Putative 40S ribosomal protein S4-like. | 0.888 |
C34E10.10 | F27C1.6 | C34E10.10.1 | F27C1.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.919 |
C34E10.10 | T10B5.3 | C34E10.10.1 | T10B5.3a.1 | Uncharacterized protein. | Utp12 domain-containing protein. | 0.942 |
C34E10.10 | Y39A1A.14 | C34E10.10.1 | Y39A1A.14.1 | Uncharacterized protein. | Ribosomal RNA small subunit methyltransferase nep-1; S-adenosyl-L-methionine-dependent pseudouridine N(1)- methyltransferase that methylates a pseudouridine in 18S rRNA. Involved the biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3- carboxypropyl) pseudouridine (m1acp3-Psi) conserved in eukaryotic 18S rRNA. Has also an essential role in 40S ribosomal subunit biogenesis independent on its methyltransferase activity, facilitating the incorporation of ribosomal protein S19 during the formation of pre- ribosomes; Belongs to the class IV-like SAM-binding methyltransferase superfami [...] | 0.889 |
C34E10.10 | ZK430.7 | C34E10.10.1 | ZK430.7.1 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.840 |
C34E10.10 | ZK795.3 | C34E10.10.1 | ZK795.3.1 | Uncharacterized protein. | Brix domain-containing protein ZK795.3. | 0.867 |
C34E10.10 | krr-1 | C34E10.10.1 | C05C8.2.1 | Uncharacterized protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.988 |
C34E10.10 | lpd-2 | C34E10.10.1 | C48E7.3.1 | Uncharacterized protein. | LiPid Depleted. | 0.898 |
C34E10.10 | wdr-46 | C34E10.10.1 | F28D1.1.2 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.852 |
page 1 of 6