Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C34E11.2 | clec-78 | C34E11.2a.1 | F47C12.2.1 | MH2 domain-containing protein. | C-type LECtin. | 0.449 |
C34E11.2 | vps-26 | C34E11.2a.1 | T20D3.7c.1 | MH2 domain-containing protein. | Vacuolar protein sorting-associated protein 26; May play a role in vesicular protein sorting, similar to the yeast retromer proteins. | 0.698 |
C34E11.2 | vps-36 | C34E11.2a.1 | F17C11.8.2 | MH2 domain-containing protein. | GLUE N-terminal domain-containing protein. | 0.809 |
clec-78 | C34E11.2 | F47C12.2.1 | C34E11.2a.1 | C-type LECtin. | MH2 domain-containing protein. | 0.449 |
vps-26 | C34E11.2 | T20D3.7c.1 | C34E11.2a.1 | Vacuolar protein sorting-associated protein 26; May play a role in vesicular protein sorting, similar to the yeast retromer proteins. | MH2 domain-containing protein. | 0.698 |
vps-26 | vps-36 | T20D3.7c.1 | F17C11.8.2 | Vacuolar protein sorting-associated protein 26; May play a role in vesicular protein sorting, similar to the yeast retromer proteins. | GLUE N-terminal domain-containing protein. | 0.757 |
vps-36 | C34E11.2 | F17C11.8.2 | C34E11.2a.1 | GLUE N-terminal domain-containing protein. | MH2 domain-containing protein. | 0.809 |
vps-36 | vps-26 | F17C11.8.2 | T20D3.7c.1 | GLUE N-terminal domain-containing protein. | Vacuolar protein sorting-associated protein 26; May play a role in vesicular protein sorting, similar to the yeast retromer proteins. | 0.757 |