Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
col-103 | col-179 | F56B3.1.1 | C34F6.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.791 |
col-106 | col-179 | Y77E11A.15.1 | C34F6.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.793 |
col-106 | col-181 | Y77E11A.15.1 | W03G11.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.884 |
col-106 | col-184 | Y77E11A.15.1 | F15A2.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.939 |
col-106 | col-8 | Y77E11A.15.1 | F11H8.3.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.680 |
col-147 | col-179 | T06E4.4.1 | C34F6.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.772 |
col-147 | ssp-34 | T06E4.4.1 | ZC168.6.1 | Col_cuticle_N domain-containing protein. | Sperm-specific class P protein 34. | 0.759 |
col-147 | ssq-1 | T06E4.4.1 | K07F5.11.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.726 |
col-147 | ssq-2 | T06E4.4.1 | T28H11.5.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.825 |
col-147 | ssq-4 | T06E4.4.1 | T28H11.1.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.732 |
col-179 | col-103 | C34F6.3.1 | F56B3.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.791 |
col-179 | col-106 | C34F6.3.1 | Y77E11A.15.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.793 |
col-179 | col-147 | C34F6.3.1 | T06E4.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.772 |
col-179 | col-181 | C34F6.3.1 | W03G11.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.889 |
col-179 | col-184 | C34F6.3.1 | F15A2.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.965 |
col-179 | col-8 | C34F6.3.1 | F11H8.3.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.942 |
col-179 | ssp-34 | C34F6.3.1 | ZC168.6.1 | Col_cuticle_N domain-containing protein. | Sperm-specific class P protein 34. | 0.724 |
col-179 | ssq-1 | C34F6.3.1 | K07F5.11.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.742 |
col-179 | ssq-2 | C34F6.3.1 | T28H11.5.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.789 |
col-179 | ssq-4 | C34F6.3.1 | T28H11.1.1 | Col_cuticle_N domain-containing protein. | Sperm-Specific family, class Q. | 0.752 |
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