Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0261.7 | C36B1.11 | B0261.7.1 | C36B1.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.584 |
B0261.7 | cyb-2.1 | B0261.7.1 | Y43E12A.1.1 | Uncharacterized protein. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.497 |
C36B1.11 | B0261.7 | C36B1.11.1 | B0261.7.1 | Uncharacterized protein. | Uncharacterized protein. | 0.584 |
C36B1.11 | R11H6.5 | C36B1.11.1 | R11H6.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.538 |
C36B1.11 | ZC308.4 | C36B1.11.1 | ZC308.4a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.538 |
C36B1.11 | ZK973.1 | C36B1.11.1 | ZK973.1.1 | Uncharacterized protein. | S1 motif domain-containing protein. | 0.539 |
C36B1.11 | cyb-2.1 | C36B1.11.1 | Y43E12A.1.1 | Uncharacterized protein. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.537 |
C36B1.11 | daf-18 | C36B1.11.1 | T07A9.6.1 | Uncharacterized protein. | Abnormal dauer formation protein 18; Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine-phosphorylated proteins (By similarity). Also acts as a lipid phosphatase, removing the phosphate in the D3 position of the inositol ring from phosphatidylinositol 3,4,5-trisphosphate. By dephosphorylating PtdIns(3,4,5)P3 antagonizes PtdIns(3,4,5)P3 production by age-1/PI3K and thus, negatively regulates daf-2-mediated processes including dauer formation, longevity, fat metabolism, chemotaxis towards salt, thermotolerance and axon guidance. Similarly, [...] | 0.541 |
C36B1.11 | inx-14 | C36B1.11.1 | F07A5.1b.1 | Uncharacterized protein. | Innexin-14; Structural component of the gap junctions. | 0.535 |
C36B1.11 | marc-3 | C36B1.11.1 | C17E4.3.1 | Uncharacterized protein. | RING-CH-type domain-containing protein. | 0.531 |
C36B1.11 | pal-1 | C36B1.11.1 | C38D4.6a.1 | Uncharacterized protein. | Homeobox protein pal-1; Transcriptional activator. Interacts with promoter regions for tbx-8.9, tbx-9, elt-1, hnd-1, scrt-1, and vab-7 genes. Binds the sequence ATTTATGAC. Binds to the enhancer region of the hlh-1 gene promoter during embryonic body wall muscle development. Activates the gene for mab-5 in embryo development. Necessary for vab-7 expression in C blastomeres in the posterior of embryos. Required for posterior V6 neuroectoblast cell fate specification during postembryonic neurogenesis (patterning) which generates the characteristic ray lineage during male tail development. [...] | 0.524 |
C36B1.11 | rsa-1 | C36B1.11.1 | C25A1.9a.1 | Uncharacterized protein. | Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1; Regulatory subunit of phosphatase let-92 which recruits let- 92/paa-1 complex to the centrosomes, thereby regulating microtubule outgrowth from centrosomes and mitotic spindle assembly ensuring the stability of kinetochore microtubules. | 0.537 |
R11H6.5 | C36B1.11 | R11H6.5.1 | C36B1.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.538 |
R11H6.5 | rsa-1 | R11H6.5.1 | C25A1.9a.1 | Uncharacterized protein. | Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1; Regulatory subunit of phosphatase let-92 which recruits let- 92/paa-1 complex to the centrosomes, thereby regulating microtubule outgrowth from centrosomes and mitotic spindle assembly ensuring the stability of kinetochore microtubules. | 0.400 |
ZC308.4 | C36B1.11 | ZC308.4a.1 | C36B1.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.538 |
ZC308.4 | cyb-2.1 | ZC308.4a.1 | Y43E12A.1.1 | Uncharacterized protein. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.846 |
ZC308.4 | daf-18 | ZC308.4a.1 | T07A9.6.1 | Uncharacterized protein. | Abnormal dauer formation protein 18; Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine-phosphorylated proteins (By similarity). Also acts as a lipid phosphatase, removing the phosphate in the D3 position of the inositol ring from phosphatidylinositol 3,4,5-trisphosphate. By dephosphorylating PtdIns(3,4,5)P3 antagonizes PtdIns(3,4,5)P3 production by age-1/PI3K and thus, negatively regulates daf-2-mediated processes including dauer formation, longevity, fat metabolism, chemotaxis towards salt, thermotolerance and axon guidance. Similarly, [...] | 0.528 |
ZC308.4 | inx-14 | ZC308.4a.1 | F07A5.1b.1 | Uncharacterized protein. | Innexin-14; Structural component of the gap junctions. | 0.468 |
ZC308.4 | marc-3 | ZC308.4a.1 | C17E4.3.1 | Uncharacterized protein. | RING-CH-type domain-containing protein. | 0.592 |
ZC308.4 | pal-1 | ZC308.4a.1 | C38D4.6a.1 | Uncharacterized protein. | Homeobox protein pal-1; Transcriptional activator. Interacts with promoter regions for tbx-8.9, tbx-9, elt-1, hnd-1, scrt-1, and vab-7 genes. Binds the sequence ATTTATGAC. Binds to the enhancer region of the hlh-1 gene promoter during embryonic body wall muscle development. Activates the gene for mab-5 in embryo development. Necessary for vab-7 expression in C blastomeres in the posterior of embryos. Required for posterior V6 neuroectoblast cell fate specification during postembryonic neurogenesis (patterning) which generates the characteristic ray lineage during male tail development. [...] | 0.512 |
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