STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srab-10Serpentine Receptor, class AB (Class A-like). (330 aa)    
Predicted Functional Partners:
gcst-1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.605
pdpr-1
Pyruvate Dehydrogenase Phosphatase Regulatory subunit.
  
 0.605
Y37E3.17
Uncharacterized protein.
  
 0.605
C26D10.3
Uncharacterized protein.
  
 0.540
sqrd-1
Pyr_redox_2 domain-containing protein.
  
 0.540
F20D6.11
Rieske domain-containing protein.
  
 0.540
Y56A3A.31
Uncharacterized protein.
  
 0.540
wah-1
Worm AIF (Apoptosis inducing factor) Homolog.
  
 0.540
Y9C9A.16
Pyr_redox_2 domain-containing protein.
  
 0.540
icl-1
Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family.
  
  
 0.476
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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