Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C37C3.1 | Y104H12D.2 | C37C3.1a.1 | Y104H12D.2.1 | DUF1768 domain-containing protein. | Uncharacterized protein. | 0.546 |
C37C3.1 | Y17G9B.5 | C37C3.1a.1 | Y17G9B.5.1 | DUF1768 domain-containing protein. | ECSIT_Cterm domain-containing protein. | 0.554 |
C37C3.1 | Y75B8A.8 | C37C3.1a.1 | Y75B8A.8.1 | DUF1768 domain-containing protein. | Uncharacterized protein. | 0.548 |
C37C3.1 | evl-14 | C37C3.1a.1 | H38K22.1.1 | DUF1768 domain-containing protein. | Uncharacterized protein. | 0.592 |
C37C3.1 | let-504 | C37C3.1a.1 | E01A2.4.2 | DUF1768 domain-containing protein. | Nkap_C domain-containing protein. | 0.544 |
C37C3.1 | pmk-1 | C37C3.1a.1 | B0218.3.1 | DUF1768 domain-containing protein. | Mitogen-activated protein kinase pmk-1; Serine/threonine kinase which responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating downstream targets. Phosphorylates snk-1 which probably regulates skn-1 nuclear translocation in response to oxidative stress. Probably by activating skn-1, involved in the up- regulation of gcs-1 and glutathione-S-transferase gst-4 expression upon bacteria infection. Up-regulates expression of gcs-1 in intestinal cells upon arsenite treatment. Functions downstream of the MAPKK sek-1 and the MAPKKK nsy-1 as the MAP kinase [...] | 0.548 |
C37C3.1 | prp-3 | C37C3.1a.1 | M03C11.7.1 | DUF1768 domain-containing protein. | Yeast PRP (Splicing factor) related. | 0.565 |
C37C3.1 | prp-38 | C37C3.1a.1 | D1054.14.1 | DUF1768 domain-containing protein. | Yeast PRP (Splicing factor) related. | 0.542 |
C37C3.1 | smu-2 | C37C3.1a.1 | Y49F6B.4.1 | DUF1768 domain-containing protein. | Smu-2 suppressor of mec-8 and unc-52 protein; Auxiliary spliceosomal protein that regulates selection of alternative splice sites in a small set of target pre-mRNA species (Probable). Selectively regulates alternative splicing of unc-52 exon 17. Thus, smu-2 mutants selectively suppress the effects of unc-52 nonsense mutations in exon 17 by promoting the accumulation of unc-52 isoforms that lack exon 17. In contrast, smu-2 mutants do not suppress the effects of an unc-52 mutation that affects the 5' splice site of exon 16. Required for normal accumulation of smu-1. Belongs to the RED family. | 0.554 |
C37C3.1 | zgpa-1 | C37C3.1a.1 | C33H5.17.1 | DUF1768 domain-containing protein. | Zinc finger G-PAtch domain-containing protein homolog. | 0.551 |
Y104H12D.2 | C37C3.1 | Y104H12D.2.1 | C37C3.1a.1 | Uncharacterized protein. | DUF1768 domain-containing protein. | 0.546 |
Y104H12D.2 | Y17G9B.5 | Y104H12D.2.1 | Y17G9B.5.1 | Uncharacterized protein. | ECSIT_Cterm domain-containing protein. | 0.674 |
Y104H12D.2 | Y75B8A.8 | Y104H12D.2.1 | Y75B8A.8.1 | Uncharacterized protein. | Uncharacterized protein. | 0.628 |
Y104H12D.2 | evl-14 | Y104H12D.2.1 | H38K22.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.617 |
Y104H12D.2 | let-504 | Y104H12D.2.1 | E01A2.4.2 | Uncharacterized protein. | Nkap_C domain-containing protein. | 0.592 |
Y104H12D.2 | pmk-1 | Y104H12D.2.1 | B0218.3.1 | Uncharacterized protein. | Mitogen-activated protein kinase pmk-1; Serine/threonine kinase which responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating downstream targets. Phosphorylates snk-1 which probably regulates skn-1 nuclear translocation in response to oxidative stress. Probably by activating skn-1, involved in the up- regulation of gcs-1 and glutathione-S-transferase gst-4 expression upon bacteria infection. Up-regulates expression of gcs-1 in intestinal cells upon arsenite treatment. Functions downstream of the MAPKK sek-1 and the MAPKKK nsy-1 as the MAP kinase [...] | 0.570 |
Y104H12D.2 | prp-3 | Y104H12D.2.1 | M03C11.7.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.569 |
Y104H12D.2 | prp-38 | Y104H12D.2.1 | D1054.14.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.604 |
Y104H12D.2 | smu-2 | Y104H12D.2.1 | Y49F6B.4.1 | Uncharacterized protein. | Smu-2 suppressor of mec-8 and unc-52 protein; Auxiliary spliceosomal protein that regulates selection of alternative splice sites in a small set of target pre-mRNA species (Probable). Selectively regulates alternative splicing of unc-52 exon 17. Thus, smu-2 mutants selectively suppress the effects of unc-52 nonsense mutations in exon 17 by promoting the accumulation of unc-52 isoforms that lack exon 17. In contrast, smu-2 mutants do not suppress the effects of an unc-52 mutation that affects the 5' splice site of exon 16. Required for normal accumulation of smu-1. Belongs to the RED family. | 0.544 |
Y104H12D.2 | zgpa-1 | Y104H12D.2.1 | C33H5.17.1 | Uncharacterized protein. | Zinc finger G-PAtch domain-containing protein homolog. | 0.599 |
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