STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C38C6.3Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
grl-5
Ground-like domain-containing protein.
   
    0.605
C50D2.1
Uncharacterized protein.
   
    0.592
ZC123.1
Uncharacterized protein.
   
    0.588
grl-7
Ground-like domain-containing protein.
   
    0.549
Y53F4B.27
Uncharacterized protein.
   
    0.543
acdh-6
Probable acyl-CoA dehydrogenase 6; Belongs to the acyl-CoA dehydrogenase family.
   
    0.538
F33D4.6
Uncharacterized protein.
   
    0.538
lips-9
LIPaSe related.
   
    0.538
K08E7.5
Uncharacterized protein.
   
    0.538
mam-3
MAM domain-containing protein.
   
    0.538
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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