STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col-131COLlagen. (308 aa)    
Predicted Functional Partners:
col-172
Col_cuticle_N domain-containing protein.
  
   
0.684
clec-85
C-type lectin domain-containing protein.
      
 0.581
grl-5
Ground-like domain-containing protein.
   
   0.550
Y53F4B.27
Uncharacterized protein.
   
    0.538
lips-9
LIPaSe related.
   
    0.518
D2092.8
Uncharacterized protein.
   
    0.513
F01D5.6
Uncharacterized protein.
   
    0.470
col-165
Col_cuticle_N domain-containing protein.
  
  
0.459
lips-7
LIPaSe related.
   
    0.454
Y65B4BL.6
Uncharacterized protein.
   
    0.448
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.